Would that help with my backup?
Nope other than use less space.
what would be different if a thin file would be backed up by your solution?
I have never compared the source file to backup file like you are doing. While the data and size should be the same I would think, I don't know if cmp would say they are the same.
i have qcow2 files, are those not Thin files?
Yes they are thin.
They are also not 1:1 the same even with not running VMs after backup....
Assuming you don't have the compression checkbox checked, qemu-img convert must be re-converting them. So, I am adding a "same format" flag to the backup script and scheduled backup form that will make the plugin use cp instead of qemu-img convert. I still need to look at something to skip the backup if the VM is off. I won't use any of this. So, it takes a bit longer to test.