Upgrade from 6.0.21-1 to 6.0.22-1 fails

onixid · 20. April 2022

I'm getting the following error when running apt upgrade:

Python

Building dependency tree... Done
Reading state information... Done
Calculating upgrade... Done
The following package was automatically installed and is no longer required:
  pve-headers-5.15.27-1-pve
Use 'apt autoremove' to remove it.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1 not fully installed or removed.
After this operation, 0 B of additional disk space will be used.
Do you want to continue? [Y/n]
Setting up openmediavault (6.0.22-1) ...
Creating configuration database ...
Migrating configuration database ...
Setting up Salt environment ...
Traceback (most recent call last):
  File "/usr/bin/salt-call", line 11, in <module>
    load_entry_point('salt==3003', 'console_scripts', 'salt-call')()
  File "/usr/lib/python3/dist-packages/salt/scripts.py", line 437, in salt_call
    import salt.cli.call
  File "/usr/lib/python3/dist-packages/salt/cli/call.py", line 6, in <module>
    import salt.cli.caller
  File "/usr/lib/python3/dist-packages/salt/cli/caller.py", line 15, in <module>
    import salt.minion
  File "/usr/lib/python3/dist-packages/salt/minion.py", line 36, in <module>
    import salt.pillar
  File "/usr/lib/python3/dist-packages/salt/pillar/__init__.py", line 16, in <module>
    import salt.fileclient
  File "/usr/lib/python3/dist-packages/salt/fileclient.py", line 30, in <module>
    import salt.utils.templates
  File "/usr/lib/python3/dist-packages/salt/utils/templates.py", line 20, in <module>
    import salt.utils.jinja
  File "/usr/lib/python3/dist-packages/salt/utils/jinja.py", line 28, in <module>
    from jinja2 import BaseLoader, Markup, TemplateNotFound, nodes
ImportError: cannot import name 'Markup' from 'jinja2' (/usr/local/lib/python3.9/dist-packages/jinja2/__init__.py)
dpkg: error processing package openmediavault (--configure):
 installed openmediavault package post-installation script subprocess returned error exit status 1
Errors were encountered while processing:
 openmediavault
E: Sub-process /usr/bin/dpkg returned an error code (1)

Alles anzeigen

I believe this happens cause my system has Jinja2 version 3.1.1 where "Markup" should be imported from jinja2.utils.markupsafe.

onixid · 20. April 2022

In case someone else falls into this problem, the solution is to run the following commands:

Code

# pip uninstall Jinja2
# pip uninstall MarkupSafe
# apt install python3-jinja2/stable
# apt install python3-markupsafe/stable

votdev · 20. April 2022

Zitat von onixid
In case someone else falls into this problem, the solution is to run the following commands:
Code
# pip uninstall Jinja2
# pip uninstall MarkupSafe
# apt install python3-jinja2/stable
# apt install python3-markupsafe/stable

Uahhh, that's one of the reasons why the root filesystem should not be touched. If you want to use custom apps, use containers to do not pollute the OMV OS.

LuigiTheHunter · 28. Oktober 2022

Hello, I hope it's okay to attach this here, I had the exact same issue but

Zitat von onixid
In case someone else falls into this problem, the solution is to run the following commands:
Code
# pip uninstall Jinja2
# pip uninstall MarkupSafe
# apt install python3-jinja2/stable
# apt install python3-markupsafe/stable

this did not fix it for me. I guess I must have messed with my installation as well, I just can't remember what I did...

When I try to reinstall OMV I get this:

Code

root@omv:/# sudo apt install openmediavault
Reading package lists... Done
Building dependency tree... Done
Reading state information... Done
The following packages were automatically installed and are no longer required:
  dkms fail2ban libnvpair3linux libqrencode4 libuutil3linux libzfs4linux libzpool4linux qrencode zfs-dkms zfs-zed zfsutils-linux
Use 'sudo apt autoremove' to remove them.
The following additional packages will be installed:
  salt-common salt-minion
Suggested packages:
  python3-pycurl python3-twisted python3-augeas
Recommended packages:
  python3-croniter debconf-utils
The following NEW packages will be installed:
  openmediavault salt-common salt-minion
0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded.
Need to get 9,750 kB of archives.
After this operation, 46.7 MB of additional disk space will be used.
Do you want to continue? [Y/n] y
Get:1 http://packages.openmediavault.org/public shaitan/main amd64 salt-common all 3003+ds-1 [7,128 kB]
Get:2 http://packages.openmediavault.org/public shaitan/main amd64 salt-minion all 3003+ds-1 [28.4 kB]
Get:3 http://packages.openmediavault.org/public shaitan/main amd64 openmediavault all 6.0.45-1 [2,594 kB]
Fetched 9,750 kB in 1s (17.9 MB/s)
Preconfiguring packages ...
Selecting previously unselected package salt-common.
(Reading database ... 216689 files and directories currently installed.)
Preparing to unpack .../salt-common_3003+ds-1_all.deb ...
Unpacking salt-common (3003+ds-1) ...
Selecting previously unselected package salt-minion.
Preparing to unpack .../salt-minion_3003+ds-1_all.deb ...
Unpacking salt-minion (3003+ds-1) ...
Selecting previously unselected package openmediavault.
Preparing to unpack .../openmediavault_6.0.45-1_all.deb ...
Unpacking openmediavault (6.0.45-1) ...
Setting up salt-common (3003+ds-1) ...
Setting up salt-minion (3003+ds-1) ...
Setting up openmediavault (6.0.45-1) ...
Creating configuration database ...
Migrating configuration database ...
Setting up Salt environment ...
[ERROR   ] 'EntryPoints' object has no attribute 'items'
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 210, in parse_args
    mixin_after_parsed_func(self)
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 880, in __setup_extended_logging
    log.setup_extended_logging(self.config)
  File "/usr/lib/python3/dist-packages/salt/log/setup.py", line 414, in setup_extended_logging
    providers = salt.loader.log_handlers(opts)
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 663, in log_handlers
    _module_dirs(
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 138, in _module_dirs
    for entry_point in entrypoints.iter_entry_points("salt.loader"):
  File "/usr/lib/python3/dist-packages/salt/utils/entrypoints.py", line 62, in iter_entry_points
    for entry_point_group, entry_points_list in entry_points.items():
AttributeError: 'EntryPoints' object has no attribute 'items'
[ERROR   ] An un-handled exception was caught by salt's global exception handler:
TypeError: '>=' not supported between instances of 'AttributeError' and 'int'
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 210, in parse_args
    mixin_after_parsed_func(self)
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 880, in __setup_extended_logging
    log.setup_extended_logging(self.config)
  File "/usr/lib/python3/dist-packages/salt/log/setup.py", line 414, in setup_extended_logging
    providers = salt.loader.log_handlers(opts)
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 663, in log_handlers
    _module_dirs(
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 138, in _module_dirs
    for entry_point in entrypoints.iter_entry_points("salt.loader"):
  File "/usr/lib/python3/dist-packages/salt/utils/entrypoints.py", line 62, in iter_entry_points
    for entry_point_group, entry_points_list in entry_points.items():
AttributeError: 'EntryPoints' object has no attribute 'items'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/bin/salt-call", line 11, in <module>
    load_entry_point('salt==3003', 'console_scripts', 'salt-call')()
  File "/usr/lib/python3/dist-packages/salt/scripts.py", line 449, in salt_call
    client.run()
  File "/usr/lib/python3/dist-packages/salt/cli/call.py", line 22, in run
    self.parse_args()
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 215, in parse_args
    mixin_after_parsed_func, traceback.format_exc(err)
  File "/usr/lib/python3.9/traceback.py", line 167, in format_exc
    return "".join(format_exception(*sys.exc_info(), limit=limit, chain=chain))
  File "/usr/lib/python3.9/traceback.py", line 120, in format_exception
    return list(TracebackException(
  File "/usr/lib/python3.9/traceback.py", line 508, in __init__
    self.stack = StackSummary.extract(
  File "/usr/lib/python3.9/traceback.py", line 340, in extract
    if limit >= 0:
TypeError: '>=' not supported between instances of 'AttributeError' and 'int'
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 210, in parse_args
    mixin_after_parsed_func(self)
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 880, in __setup_extended_logging
    log.setup_extended_logging(self.config)
  File "/usr/lib/python3/dist-packages/salt/log/setup.py", line 414, in setup_extended_logging
    providers = salt.loader.log_handlers(opts)
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 663, in log_handlers
    _module_dirs(
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 138, in _module_dirs
    for entry_point in entrypoints.iter_entry_points("salt.loader"):
  File "/usr/lib/python3/dist-packages/salt/utils/entrypoints.py", line 62, in iter_entry_points
    for entry_point_group, entry_points_list in entry_points.items():
AttributeError: 'EntryPoints' object has no attribute 'items'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/bin/salt-call", line 11, in <module>
    load_entry_point('salt==3003', 'console_scripts', 'salt-call')()
  File "/usr/lib/python3/dist-packages/salt/scripts.py", line 449, in salt_call
    client.run()
  File "/usr/lib/python3/dist-packages/salt/cli/call.py", line 22, in run
    self.parse_args()
  File "/usr/lib/python3/dist-packages/salt/utils/parsers.py", line 215, in parse_args
    mixin_after_parsed_func, traceback.format_exc(err)
  File "/usr/lib/python3.9/traceback.py", line 167, in format_exc
    return "".join(format_exception(*sys.exc_info(), limit=limit, chain=chain))
  File "/usr/lib/python3.9/traceback.py", line 120, in format_exception
    return list(TracebackException(
  File "/usr/lib/python3.9/traceback.py", line 508, in __init__
    self.stack = StackSummary.extract(
  File "/usr/lib/python3.9/traceback.py", line 340, in extract
    if limit >= 0:
TypeError: '>=' not supported between instances of 'AttributeError' and 'int'
dpkg: error processing package openmediavault (--configure):
 installed openmediavault package post-installation script subprocess returned error exit status 1
Processing triggers for rsyslog (8.2102.0-2+deb11u1) ...
Errors were encountered while processing:
 openmediavault
E: Sub-process /usr/bin/dpkg returned an error code (1)

Alles anzeigen

Sorry, for bothering, I just don't have any clue where to look.

Frepke · 28. Oktober 2022

Maybe you can check here: https://docs.openmediavault.or…stallation/on_debian.html

LuigiTheHunter · 30. Oktober 2022

Zitat von Frepke

Maybe you can check here: https://docs.openmediavault.or…stallation/on_debian.html

Thanks, but I tried things I found from this website and nothing helped yet. I think I have the wrong version of salt or something, I don't know what else could cause this...

LuigiTheHunter · 30. Oktober 2022

The versions I have are: salt==3003 MarkupSafe==1.1.1 and Jinja2==2.11.3 is that correct so far? So far it seems that I have identified the issue. It seems to be the salt program. I tried downgrading omv but with no success: apt install openmediavault/6.0.42-1 for example, no version seems to be in my apt repos. Also when I run omv-salt stage run deploy I get this:

Code

Traceback (most recent call last):
  File "/usr/sbin/omv-salt", line 152, in <module>
    sys.exit(main())
  File "/usr/sbin/omv-salt", line 147, in main
    cli()
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 1130, in __call__
    return self.main(*args, **kwargs)
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 1055, in main
    rv = self.invoke(ctx)
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 1657, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 1657, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 1404, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/usr/local/lib/python3.9/dist-packages/click/core.py", line 760, in invoke
    return __callback(*args, **kwargs)
  File "/usr/sbin/omv-salt", line 81, in stage_run
    caller = salt.client.Caller(mopts=mopts)
  File "/usr/lib/python3/dist-packages/salt/client/__init__.py", line 2104, in __init__
    self.sminion = salt.minion.SMinion(self.opts)
  File "/usr/lib/python3/dist-packages/salt/minion.py", line 917, in __init__
    opts["grains"] = salt.loader.grains(opts)
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 874, in grains
    funcs = grain_funcs(opts, proxy=proxy, context=context or {})
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 748, in grain_funcs
    _utils = utils(opts, proxy=proxy)
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 439, in utils
    _module_dirs(opts, "utils", ext_type_dirs="utils_dirs"),
  File "/usr/lib/python3/dist-packages/salt/loader.py", line 138, in _module_dirs
    for entry_point in entrypoints.iter_entry_points("salt.loader"):
  File "/usr/lib/python3/dist-packages/salt/utils/entrypoints.py", line 62, in iter_entry_points
    for entry_point_group, entry_points_list in entry_points.items():
AttributeError: 'EntryPoints' object has no attribute 'items'

Alles anzeigen

Maybe I have to reset the salt config file or something?

sparx82 · 10. Januar 2023

I also run into the same problem as LuigiTheHunter. Were you able to solve this?

sparx82 · 27. Januar 2023

Following this post solved the problem with OMV for me:

Beitrag

Can't apply config changes : omv-salt 'EntryPoints' object has no attribute 'items'

Edit: Looks like I have fixed it:
Solution:
I did not properly remove installed libraries. Maybe I messed up with pip vs pip3 vs python3 -m pip.
I now removed all custom libraries with
python3 -m pip freeze | xargs python3 -m pip uninstall -y
If you are doing this, please be aware that this will remove all your pip.installed libraries and may break your python projects
Then I reinstalled essential libraries from package manager
apt reinstall python3-jinja2 python3-markupsafe salt-common salt-minion
…

Paul.

14. November 2022

LuigiTheHunter · 8. Februar 2023

Zitat von sparx82

Following this post solved the problem with OMV for me:

Beitrag

Can't apply config changes : omv-salt 'EntryPoints' object has no attribute 'items'

Edit: Looks like I have fixed it:
Solution:
I did not properly remove installed libraries. Maybe I messed up with pip vs pip3 vs python3 -m pip.
I now removed all custom libraries with
python3 -m pip freeze | xargs python3 -m pip uninstall -y
If you are doing this, please be aware that this will remove all your pip.installed libraries and may break your python projects
Then I reinstalled essential libraries from package manager
apt reinstall python3-jinja2 python3-markupsafe salt-common salt-minion
…

Paul.

14. November 2022

Thanks for this, I wasn't able to recover and reinstalled OMV from there.

Upgrade from 6.0.21-1 to 6.0.22-1 fails

onixid 20. April 2022

Jetzt mitmachen!

Tags