Problems with omv-upgrade

uNbAs · Dec 5th 2022

Hi!!!

Recently I have a upgrade in web page bug after run install upgrade fail ... I go to ssh and run omv-upgrade but too fail:

Python

root@openmediavault:# omv-upgrade
Get:1 file:/var/cache/openmediavault/archives  InRelease
Ign:1 file:/var/cache/openmediavault/archives  InRelease
Get:2 file:/var/cache/openmediavault/archives  Release
Ign:2 file:/var/cache/openmediavault/archives  Release
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Hit:6 http://deb.debian.org/debian bullseye InRelease
Get:7 http://deb.debian.org/debian bullseye-updates InRelease [44.1 kB]
Get:8 http://security.debian.org/debian-security bullseye-security InRelease [48.4 kB]
Get:9 http://httpredir.debian.org/debian bullseye-backports InRelease [49.0 kB]
Hit:10 http://packages.openmediavault.org/public shaitan InRelease
Get:11 https://download.docker.com/linux/debian bullseye InRelease [43.3 kB]
Hit:12 https://openmediavault-plugin-developers.github.io/packages/debian shaitan InRelease
Hit:13 https://openmediavault.github.io/packages shaitan InRelease
Hit:14 https://repo.jellyfin.org/debian bullseye InRelease
Fetched 185 kB in 2s (97.7 kB/s)
Reading package lists... Done
Reading package lists... Done
Building dependency tree... Done
Reading state information... Done
Calculating upgrade... Done
The following packages will be REMOVED:
  linux-image-5.18.0-0.deb11.4-amd64
0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
1 not fully installed or removed.
After this operation, 500 MB disk space will be freed.
(Reading database ... 57465 files and directories currently installed.)
Removing linux-image-5.18.0-0.deb11.4-amd64 (5.18.16-1~bpo11+1) ...
/etc/kernel/postrm.d/initramfs-tools:
update-initramfs: Deleting /boot/initrd.img-5.18.0-0.deb11.4-amd64
/etc/kernel/postrm.d/zz-update-grub:
Generating grub configuration file ...
Found linux image: /boot/vmlinuz-6.0.0-0.deb11.2-amd64
Found initrd image: /boot/initrd.img-6.0.0-0.deb11.2-amd64
Found linux image: /boot/vmlinuz-5.19.0-0.deb11.2-amd64
Found initrd image: /boot/initrd.img-5.19.0-0.deb11.2-amd64
Adding boot menu entry for UEFI Firmware Settings ...
done
Setting up openmediavault (6.1.0-1) ...
Creating configuration database ...
Migrating configuration database ...
Setting up Salt environment ...
Traceback (most recent call last):
  File "/usr/bin/salt-call", line 11, in <module>
    load_entry_point('salt==3003', 'console_scripts', 'salt-call')()
  File "/usr/lib/python3/dist-packages/salt/scripts.py", line 437, in salt_call
    import salt.cli.call
  File "/usr/lib/python3/dist-packages/salt/cli/call.py", line 6, in <module>
    import salt.cli.caller
  File "/usr/lib/python3/dist-packages/salt/cli/caller.py", line 15, in <module>
    import salt.minion
  File "/usr/lib/python3/dist-packages/salt/minion.py", line 36, in <module>
    import salt.pillar
  File "/usr/lib/python3/dist-packages/salt/pillar/__init__.py", line 16, in <module>
    import salt.fileclient
  File "/usr/lib/python3/dist-packages/salt/fileclient.py", line 30, in <module>
    import salt.utils.templates
  File "/usr/lib/python3/dist-packages/salt/utils/templates.py", line 20, in <module>
    import salt.utils.jinja
  File "/usr/lib/python3/dist-packages/salt/utils/jinja.py", line 28, in <module>
    from jinja2 import BaseLoader, Markup, TemplateNotFound, nodes
ImportError: cannot import name 'Markup' from 'jinja2' (/usr/local/lib/python3.9/dist-packages/jinja2/__init__.py)
dpkg: error processing package openmediavault (--configure):
 installed openmediavault package post-installation script subprocess returned error exit status 1
Errors were encountered while processing:
 openmediavault
E: Sub-process /usr/bin/dpkg returned an error code (1)
root@openmediavault:#

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votdev · Dec 5th 2022

Do you have upgraded the jinja2 Python package manually via PIP? If so, undo that because this is not allowed because of exactly that reason you are facing now. PIP can break software that is installed via Debian APT.

Check https://docs.openmediavault.or….html#installing-software for more information.

uNbAs · Dec 5th 2022

Hi votdev!!!

I dont install jinja2 manually and not use pip. I only install JellyFin but use apt. what is the version I need in OVM for try to install.?

votdev · Dec 5th 2022

Quote from uNbAs

Hi votdev!!!

I dont install jinja2 manually and not use pip. I only install JellyFin but use apt. what is the version I need in OVM for try to install.?

Maybe JellyFin is causing the problem. If you install additional software, please use containers to do not pollute the OS with things that out of control of OMV. OMV is strictly based on Debian 11, no backport packages are allowed because packages from there might change the API of the used software.

votdev · Dec 5th 2022

Oh yes, you are using a package repo from JellyFin: https://repo.jellyfin.org/debian bullseye InRelease

They might ship packages that are incompatible to versions that are shipped with Debian 11.

uNbAs · Dec 5th 2022

I understand what you're saying. But JellyFin has no python dependencies, nor jinja2, I think the problem is actually related to the system upgrade. ~~In fact, it doesn't let you uninstall or install anything.~~

after remove JellyFin adn dependencies: (Same error) ¿What is the version I need for Jinja2?

Python

root@openmediavault:/# omv-upgrade
Get:1 file:/var/cache/openmediavault/archives  InRelease
Ign:1 file:/var/cache/openmediavault/archives  InRelease
Get:2 file:/var/cache/openmediavault/archives  Release
Ign:2 file:/var/cache/openmediavault/archives  Release
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Ign:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Get:3 file:/var/cache/openmediavault/archives  Packages
Get:4 file:/var/cache/openmediavault/archives  Translation-en
Ign:4 file:/var/cache/openmediavault/archives  Translation-en
Get:5 file:/var/cache/openmediavault/archives  Translation-es
Ign:5 file:/var/cache/openmediavault/archives  Translation-es
Hit:6 http://deb.debian.org/debian bullseye InRelease
Hit:7 http://deb.debian.org/debian bullseye-updates InRelease
Hit:8 http://security.debian.org/debian-security bullseye-security InRelease
Get:9 https://download.docker.com/linux/debian bullseye InRelease [43.3 kB]
Hit:10 http://httpredir.debian.org/debian bullseye-backports InRelease
Hit:11 https://openmediavault.github.io/packages shaitan InRelease
Hit:12 http://packages.openmediavault.org/public shaitan InRelease
Hit:13 https://openmediavault-plugin-developers.github.io/packages/debian shaitan InRelease
Get:14 https://repo.jellyfin.org/debian bullseye InRelease [6639 B]
Fetched 50.0 kB in 2s (32.5 kB/s)
Reading package lists... Done
Reading package lists... Done
Building dependency tree... Done
Reading state information... Done
Calculating upgrade... Done
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1 not fully installed or removed.
After this operation, 0 B of additional disk space will be used.
Setting up openmediavault (6.1.0-1) ...
Creating configuration database ...
Migrating configuration database ...
Setting up Salt environment ...
Traceback (most recent call last):
File "/usr/bin/salt-call", line 11, in <module>
load_entry_point('salt==3003', 'console_scripts', 'salt-call')()
File "/usr/lib/python3/dist-packages/salt/scripts.py", line 437, in salt_call
import salt.cli.call
File "/usr/lib/python3/dist-packages/salt/cli/call.py", line 6, in <module>
import salt.cli.caller
File "/usr/lib/python3/dist-packages/salt/cli/caller.py", line 15, in <module>
import salt.minion
File "/usr/lib/python3/dist-packages/salt/minion.py", line 36, in <module>
import salt.pillar
File "/usr/lib/python3/dist-packages/salt/pillar/__init__.py", line 16, in <module>
import salt.fileclient
File "/usr/lib/python3/dist-packages/salt/fileclient.py", line 30, in <module>
import salt.utils.templates
File "/usr/lib/python3/dist-packages/salt/utils/templates.py", line 20, in <module>
import salt.utils.jinja
File "/usr/lib/python3/dist-packages/salt/utils/jinja.py", line 28, in <module>
from jinja2 import BaseLoader, Markup, TemplateNotFound, nodes
ImportError: cannot import name 'Markup' from 'jinja2' (/usr/local/lib/python3.9/dist-packages/jinja2/__init__.py)
dpkg: error processing package openmediavault (--configure):
installed openmediavault package post-installation script subprocess returned error exit status 1
Errors were encountered while processing:
openmediavault
E: Sub-process /usr/bin/dpkg returned an error code (1)
root@openmediavault:/#

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ryecoaaron · Dec 5th 2022

What is the output of:

dpkg -l | grep python

apt-cache policy python3-markupsafe python3-jinja2

Soma · Dec 5th 2022

Quote from uNbAs

Get:14 https://repo.jellyfin.org/debian bullseye InRelease [6639 B]

Quote from uNbAs

after remove JellyFin adn dependencies: (Same error)

You removed jellyfin but you left the repo.
Might not solve it but if it's to uninstall, all mentions to it should also be removed,

uNbAs · Dec 5th 2022

ryecoaaron Thanks for your reply

Result of commands = https://justpaste.it/clxsp (Its too long for publish in forum)

Soma One repository not cause problems on software installed. If this is a cause is new for me ... But thanks for your reply

ryecoaaron · Dec 5th 2022

Quote from uNbAs

Result of commands = https://justpaste.it/clxsp (Its too long for publish in forum)

Is it possible for you to put it in a file and attach it to a post? There are no linefeeds in your link and that is a nightmare to look at.

uNbAs · Dec 5th 2022

Quote from ryecoaaron

Is it possible for you to put it in a file and attach it to a post? There are no linefeeds in your link and that is a nightmare to look at.

Of course!!!

I installed manually (now) > python3-markupsafe but this package not found python3-jinja2

ryecoaaron · Dec 5th 2022

Quote from uNbAs

this package not found python3-jinja2

It is in the output list though. apt-cache policy python3-jinja2 should show something.

aaron@omv6dev:~$ apt-cache policy python3-jinja2

python3-jinja2:

Installed: 2.11.3-1

Candidate: 2.11.3-1

Version table:

3.0.3-1~bpo11+1 100

100 http://httpredir.debian.org/debian bullseye-backports/main amd64 Packages

*** 2.11.3-1 500

500 http://deb.debian.org/debian bullseye/main amd64 Packages

100 /var/lib/dpkg/status

uNbAs · Dec 5th 2022

Excuse me, but I don't understand the answer or how to continue to solve the problem

votdev · Dec 5th 2022

The problem seems to be the path where Python looks for the package. On my systems Jinja2 is located at /usr/lib/python3/dist-packages/jinja2/__init__.py whereas the error message says it tries to load it at /usr/local/lib/python3.9/dist-packages/jinja2/__init__.py. /usr/lib/python3 !== /usr/local/lib/python3.9.

ryecoaaron · Dec 5th 2022

Quote from uNbAs

Excuse me, but I don't understand the answer or how to continue to solve the problem

I wanted to see the output of the command in post #12

uNbAs · Dec 5th 2022

Quote from votdev

The problem seems to be the path where Python looks for the package. On my systems Jinja2 is located at /usr/lib/python3/dist-packages/jinja2/__init__.py whereas the error message says it tries to load it at /usr/local/lib/python3.9/dist-packages/jinja2/__init__.py. /usr/lib/python3 !== /usr/local/lib/python3.9.

I assume you have the latest version released, correct?

Soma · Dec 5th 2022

Quote from uNbAs

One repository not cause problems on software installed. If this is a cause is new for me ... But thanks for your reply

Maybe you're right. I'm not that versed in Linux.

But let me explain it as I understand it:

You have the repos for Debian that point to specific versions of packages and dependencies.

You add a "independent" repo in order to be able to install other apts that rely on other specific dependencies.
Both require the same apt but with different versions.

You run apt to upgrade versions and then dependencies clash, or NOT.

This is how I see it and why I try to keep the OS as vanilla as I can.
What need to be run, then docker or podman are there.

This is a really layman view of this issue so, take it with a pinch of salt.
Hope you fix this,

uNbAs · Dec 5th 2022

Quote from ryecoaaron

I wanted to see the output of the command in post #12

Im sorry!

Quote

root@openmediavault:# apt-cache policy python3-markupsafe
python3-markupsafe:
Instalados: 1.1.1-1+b3
Candidato: 1.1.1-1+b3
Tabla de versión:
2.0.1-2~bpo11+1 100
100 http://httpredir.debian.org/debian bullseye-backports/main amd64 Packages
*** 1.1.1-1+b3 500
500 http://deb.debian.org/debian bullseye/main amd64 Packages
100 /var/lib/dpkg/status
root@openmediavault:# apt-cache policy python3-jinja2
python3-jinja2:
Instalados: 2.11.3-1
Candidato: 2.11.3-1
Tabla de versión:
3.0.3-1~bpo11+1 100
100 http://httpredir.debian.org/debian bullseye-backports/main amd64 Packages
*** 2.11.3-1 500
500 http://deb.debian.org/debian bullseye/main amd64 Packages
100 /var/lib/dpkg/status
root@openmediavault:#

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ryecoaaron · Dec 5th 2022

What about: sudo find /usr/ -type d -name "*jinja*"

uNbAs · Dec 5th 2022

Soma

Quote

You have the repos for Debian that point to specific versions of packages and dependencies.

You add a "independent" repo in order to be able to install other apts that rely on other specific dependencies.
Both require the same apt but with different versions.

First sorry my English, no is very fine

But you have a error of think. One repo contain software and software have dependencies. But have some odd...

.- The repo contain software with no dependencies (Not normal)

.- The repo contain software but de dependencies no affect (Really normal)

.- The repo contain software but break dependencies of system (This is rare but it can happen) in this case apt, zypper and others create alert in the shell

In this case JellyFin dont contain any library for break OMV. (You can check de build info from here https://repo.jellyfin.org/rele…ons/stable/server/10.8.8/)

I understand that it is best to use docker, and I have used it in other versions of OMV, but I don't like the manager that is included in the plugins too much. I liked the version 4 or 5 I think it was.

Quote

Maybe you're right. I'm not that versed in Linux.

No worry in this world (GNU/Linux) never stop learning

Problems with omv-upgrade

votdev Dec 5th 2022

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