Cannot install updates

1st Official Post

    Hi everyone,


    It's since a week that I cannot install updates on my OMV system at home.

    I recently upgraded from 6 to 7, and I also run the fix6to7upgrade script (from here), due to some issues with omv-extras, which I solved with that script. I don't know if the problem I have now with the updates is also connected to the upgrade or not.

    Basically, I have the notification about 6 updates, but when I click on it to go to the updates panel and I launch the updates, nothing happens.

    I've attached a GIF, but don't know if it is clear...


    I've also tried with apt update but it doesn't show anything to upgrade.

    I am having the same issues. Since the upgrade to OMV-7 I have never had a update install using the OMV update command. Says there is none available.

    • Official Post

    Did you run the fix6to7upgrade script?

    omv 8.1.1-1 synchrony | 6.17 proxmox kernel

    plugins :: omvextrasorg 8.0.2 | kvm 8.0.7 | compose 8.1.5 | cterm 8.0 | borgbackup 8.1.7 | cputemp 8.0 | mergerfs 8.0 | scripts 8.0.1 | writecache 8.1.1


    omv-extras.org plugins source code and issue tracker - github - changelogs


    Please try ctrl-shift-R and read this before posting a question.

    Please put your OMV system details in your signature.
    Please don't PM for support... Too many PMs!

    • Official Post
    Quote from ml3456

    Do I just copy and past that into ssh?

    No. I was hoping that would be a trigger to search the forum for the script. Just run:

    sudo wget -O - https://github.com/OpenMediaVault-Plugin-Developers/installScript/raw/master/fix6to7upgrade | sudo bash

    omv 8.1.1-1 synchrony | 6.17 proxmox kernel

    plugins :: omvextrasorg 8.0.2 | kvm 8.0.7 | compose 8.1.5 | cterm 8.0 | borgbackup 8.1.7 | cputemp 8.0 | mergerfs 8.0 | scripts 8.0.1 | writecache 8.1.1


    omv-extras.org plugins source code and issue tracker - github - changelogs


    Please try ctrl-shift-R and read this before posting a question.

    Please put your OMV system details in your signature.
    Please don't PM for support... Too many PMs!

    Updates wont install. Getting a 500 server error (screenshot below). Tried rebooting and installing twice. Same error.

    Any suggestions?


    ML

    0 selected / 77 total

    Upgrade system

    Reading package lists...
    Building dependency tree...
    Reading state information...
    Calculating upgrade...
    The following NEW packages will be installed: linux-headers-6.1.0-27-amd64 linux-headers-6.1.0-27-common linux-image-6.1.0-27-amd64
    The following packages will be upgraded: base-files bsdextrautils bsdutils btrfs-progs clamav-base clamav-daemon clamav-freshclam clamdscan containerd.io curl distro-info-data fdisk grub-common grub-pc grub-pc-bin grub2-common gtk-update-icon-cache intel-microcode iputils-ping libblkid1 libc-bin libc-dev-bin libc-l10n libc6 libc6-dev libcjson1 libclamav11 libcurl4 libfdisk1 libglib2.0-0 libmount1 libmpg123-0 libnghttp2-14 libnss-myhostname libnss-resolve libnss-systemd libnss3 libntfs-3g89 libnvidia-container-tools libnvidia-container1 libpython3.11 libpython3.11-minimal libpython3.11-stdlib libsmartcols1 libsqlite3-0 libssl3 libsystemd-shared libsystemd0 libudev1 libuuid1 linux-compiler-gcc-12-x86 linux-headers-amd64 linux-image-amd64 linux-kbuild-6.1 linux-libc-dev locales mount ntfs-3g nvidia-container-toolkit nvidia-container-toolkit-base openmediavault openssl python3-cryptography python3.11 python3.11-minimal smartmontools systemd systemd-resolved systemd-sysv udev util-linux util-linux-extra xserver-common xserver-xorg-core
    apt-listchanges: Reading changelogs...
    Preconfiguring packages ...
    74 upgraded, 3 newly installed, 0 to remove and 0 not upgraded.
    Need to get 0 B/186 MB of archives.
    After this operation, 470 MB of additional disk space will be used.
    dpkg: unrecoverable fatal error, aborting: unknown system group 'netdata' in statoverride file; the system group got removed
    before the override, which is most probably a packaging bug, to recover you
    can remove the override manually with dpkg-statoverride

    ** CONNECTION LOST **

    █

    500 - Internal Server Error Failed to execute command 'export PATH=/bin:/sbin:/usr/bin:/usr/sbin:/usr/local/bin:/usr/local/sbin; export LANG=C.UTF-8; export LANGUAGE=; export DEBIAN_FRONTEND=noninteractive; apt-get --yes --allow-downgrades --allow-change-held-packages --fix-broken --fix-missing --auto-remove --allow-unauthenticated --show-upgraded --option DPkg::Options::="--force-confold" dist-upgrade 2>&1' with exit code '100': Reading package lists...

    Building dependency tree...

    Reading state information...

    Calculating upgrade...

    The following NEW packages will be installed: linux-headers-6.1.0-27-amd64 linux-headers-6.1.0-27-common linux-image-6.1.0-27-amd64
    The following packages will be upgraded: base-files bsdextrautils bsdutils btrfs-progs clamav-base clamav-daemon clamav-freshclam clamdscan containerd.io curl distro-info-data fdisk grub-common grub-pc grub-pc-bin grub2-common gtk-update-icon-cache intel-microcode iputils-ping libblkid1 libc-bin libc-dev-bin libc-l10n libc6 libc6-dev libcjson1 libclamav11 libcurl4 libfdisk1 libglib2.0-0 libmount1 libmpg123-0 libnghttp2-14 libnss-myhostname libnss-resolve libnss-systemd libnss3 libntfs-3g89 libnvidia-container-tools libnvidia-container1 libpython3.11 libpython3.11-minimal libpython3.11-stdlib libsmartcols1 libsqlite3-0 libssl3 libsystemd-shared libsystemd0 libudev1 libuuid1 linux-compiler-gcc-12-x86 linux-headers-amd64 linux-image-amd64 linux-kbuild-6.1 linux-libc-dev locales mount ntfs-3g nvidia-container-toolk...

    • Official Post

    Run: sudo omv-upgrade

    omv 8.1.1-1 synchrony | 6.17 proxmox kernel

    plugins :: omvextrasorg 8.0.2 | kvm 8.0.7 | compose 8.1.5 | cterm 8.0 | borgbackup 8.1.7 | cputemp 8.0 | mergerfs 8.0 | scripts 8.0.1 | writecache 8.1.1


    omv-extras.org plugins source code and issue tracker - github - changelogs


    Please try ctrl-shift-R and read this before posting a question.

    Please put your OMV system details in your signature.
    Please don't PM for support... Too many PMs!

    Quote from ml3456

    dpkg: unrecoverable fatal error, aborting: unknown system group 'netdata' in statoverride file; the system group got removed
    before the override, which is most probably a packaging bug, to recover you
    can remove the override manually with dpkg-statoverride

    Maybe this explains where it's failing.

    Now, if running that command will solve or do worst, that's a different story.


    ryecoaaron can help better

    Tried running it and saw 72 update then stopped in ssh. Here was error. Had netdata once but removed it. Wasn't even part of OMV.


    Thanks so much for your help.


    ML


    Preconfiguring packages ...

    dpkg: unrecoverable fatal error, aborting:

    unknown system group 'netdata' in statoverride file; the system group got removed

    before the override, which is most probably a packaging bug, to recover you

    can remove the override manually with dpkg-statoverride

    E: Sub-process /usr/bin/dpkg returned an error code (2)

    Finally got this to work. 2 things.


    1. I was getting a error about netdata in a file failing the updates. I tool netdata out. It was installed outside of omv and portainer and left some traces in a file in a dpkg file. Went to /var/lib/dpkg/statoverride and edit the file removing 5-6 instances of netdata in it.

    2. Ran sudo omv-backports NO


    After update made sure backports via omv were disable to be sure.



    Boom, everything worked!


    Hope this helps.

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