Ok, I have been throwing files around for a while and am seeing some odd behaviour, the problem is that i am totally unsure if it's Greyhole, Samba or Windows related.
Transfer rates I have been getting when copying a large folder (38GB, 364 files, various sizes) are as follows:
WindowsHomeServer 2011 -> Windows 8.1 = ~100MB/s at peak but dropping to ~50MB/s for the small files. Average is around 80-90MB/s
WindowsHomeServer 2011 -> OMV greyhole share = fairly steady ~35MB/s
Windows 8.1 -> OMV greyhole share = very steady ~75-80MB/s
WHS 2011 -> OMV share outside of the greyhole pool (but on same drive) = ~35MB/s
Now this would seem to point to WHS2011 being the problem but the slow file transfer from that is only to OMV. The WHS machine is my main longterm server and has been reliably transferring data to and from Windows and Mac OS X machines, at the speed I would expect, for years without issue.